Pipelines

Exacto exposes its commands as two end-to-end pipelines for long-read mutant-proteoform analysis. Each page below walks you through inputs, intermediate artifacts, and final outputs, with cross-links to the relevant commands.

Available Pipelines

Mutant Proteoform Prediction
Identify somatic and germline variants from long-read DNA and RNA, integrate them, and translate full-length transcripts to mutant proteoforms.

Variation Graph Construction
Build individualized genome and transcriptome variation graphs from variant calls.